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Items 1 - 20 of 94
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1:

Microarray analysis of gene expression during the cell cycle.

Cooper S, Shedden K.

Cell Chromosome. 2003 Sep 19;2(1):1.

PMID: 14577836 [PubMed - as supplied by publisher]

2:

Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods.

Shedden K, Cooper S.

Nucleic Acids Res. 2002 Jul 1;30(13):2920-9.

PMID: 12087178 [PubMed - indexed for MEDLINE]

3:

Identifying periodically expressed transcripts in microarray time series data.

Wichert S, Fokianos K, Strimmer K.

Bioinformatics. 2004 Jan 1;20(1):5-20.

PMID: 14693803 [PubMed - indexed for MEDLINE]

4:

Analysis of cell-cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization.

Shedden K, Cooper S.

Proc Natl Acad Sci U S A. 2002 Apr 2;99(7):4379-84. Epub 2002 Mar 19.

PMID: 11904377 [PubMed - indexed for MEDLINE]

5:

Identification of significant periodic genes in microarray gene expression data.

Chen J.

BMC Bioinformatics. 2005 Nov 30;6:286.

PMID: 16318631 [PubMed - indexed for MEDLINE]

6:

Rejoinder: whole-culture synchronization cannot, and does not, synchronize cells.

Cooper S.

Trends Biotechnol. 2004 Jun;22(6):274-6.

PMID: 15158054 [PubMed - indexed for MEDLINE]

7:

Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes.

Chou JW, Zhou T, Kaufmann WK, Paules RS, Bushel PR.

BMC Bioinformatics. 2007 Nov 2;8:427.

PMID: 17980031 [PubMed - indexed for MEDLINE]

8:

Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.

Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.

BMC Genomics. 2006 Mar 21;7:59.

PMID: 16551369 [PubMed - indexed for MEDLINE]

9:

Role for E2F in control of both DNA replication and mitotic functions as revealed from DNA microarray analysis.

Ishida S, Huang E, Zuzan H, Spang R, Leone G, West M, Nevins JR.

Mol Cell Biol. 2001 Jul;21(14):4684-99.

PMID: 11416145 [PubMed - indexed for MEDLINE]

10:

Tracking the herd: resynchronization analysis of cell-cycle gene expression data in Saccharomyces cerevisiae.

Qiu P, Jane Wang Z, Ray Liu KJ.

Conf Proc IEEE Eng Med Biol Soc. 2005;5:4826-9.

PMID: 17281322 [PubMed - in process]

11:

Self-Organizing Maps with Statistical Phase Synchronization (SOMPS) for analyzing cell cycle-specific gene expression data.

Kim CS.

Stat Appl Genet Mol Biol. 2008;7:Article1. Epub 2008 Jan 15.

PMID: 18241191 [PubMed - indexed for MEDLINE]

13:

Reply: whole-culture synchronization - effective tools for cell cycle studies.

Spellman PT, Sherlock G.

Trends Biotechnol. 2004 Jun;22(6):270-3.

PMID: 15158053 [PubMed - indexed for MEDLINE]

14:

Genome-wide expression analysis of plant cell cycle modulated genes.

Breyne P, Zabeau M.

Curr Opin Plant Biol. 2001 Apr;4(2):136-42. Review.

PMID: 11228436 [PubMed - indexed for MEDLINE]

15:

Effects of DNA-targeted ionizing radiation produced by 5-[125I]iodo-2'-deoxyuridine on global gene expression in primary human cells.

Sokolov MV, Neumann RD, Panyutin IG.

BMC Genomics. 2007 Jun 26;8:192.

PMID: 17594496 [PubMed - indexed for MEDLINE]

16:

Polynomial model approach for resynchronization analysis of cell-cycle gene expression data.

Qiu P, Wang ZJ, Liu KJ.

Bioinformatics. 2006 Apr 15;22(8):959-66. Epub 2006 Jan 24.

PMID: 16434439 [PubMed - indexed for MEDLINE]

17:

Permutation-validated principal components analysis of microarray data.

Landgrebe J, Wurst W, Welzl G.

Genome Biol. 2002;3(4):RESEARCH0019. Epub 2002 Mar 22.

PMID: 11983060 [PubMed - indexed for MEDLINE]

18:

Model-based methods for identifying periodically expressed genes based on time course microarray gene expression data.

Luan Y, Li H.

Bioinformatics. 2004 Feb 12;20(3):332-9.

PMID: 14960459 [PubMed - indexed for MEDLINE]

19:

The Schaechter-Bentzon-Maaløe experiment and the analysis of cell cycle events in eukaryotic cells.

Cooper S.

Trends Microbiol. 2002 Apr;10(4):169-73.

PMID: 11912022 [PubMed - indexed for MEDLINE]

20:

Nocodazole does not synchronize cells: implications for cell-cycle control and whole-culture synchronization.

Cooper S, Iyer G, Tarquini M, Bissett P.

Cell Tissue Res. 2006 May;324(2):237-42. Epub 2006 Jan 24.

PMID: 16432713 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 94
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